Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835792.1_cds_XP_016506029.1_19299
CDS Infomation

[gene=LOC107823842] [db_xref=GeneID:107823842] [protein=fasciclin-like arabinogalactan protein 17] [protein_id=XP_016506029.1] [location=join(5259..6561,8210..8256)] [gbkey=CDS]
Sequence

ATGGATTCCCAGATCTATGGCTTCTTGTTTACTTTGATTCTCTTCTTCTCCATTACAGGT
GCTGCATTGCAAGAAAGCCCATCTGCCAAACATCAAATGTCAGCACCTCAGATCAACTCA
AACTCAGTTCTTGTAGCCCTTTTGGATTCCCACTACACTGAACTCTCTGAGCTAGTAGAA
AAAGCCCTCTTGCTTCAAACCTTAGAAGAAGCCGTCACCAAACACAATATCACCATTTTC
GCACCCAAAAACGAAGCTCTTGAACGCGATTTAGATCCCGAGTTCAAACGTTTCTTGCTT
GAACCTGGGAATCTCAAATCCCTTCAAAAGCTTCTCCTCTTTCACATGATTCCCACTCGC
ATTCAGTCCCTCCATTGGCCTAAAACTGAGCTCAAACCCCGCCATCACTCCACTCTCTGC
CCCGGAGACGAGCGTATCTCTGTTTTAAGAAAATCTGGAGATAGAATGGTAAGCATGGCG
AAAGTTATTCGTGCAGATGATATTATCAAACCGGACGGAATAATCCATGGGATAGAACGC
GTCTTGATACCCAAATCAGTGCAACAAGATTTCAATACGAGAAGAAGCCTTCGTTCAATT
TCAGCTGTATTACCAGAAGGAGCACCAGAAGTGGACCCAAGAACAAACAGATTGAAAAAA
AAGCCAACAATCCCAGTACCCGCTGGAGCACCACCGGTATTACCCATTTACTCAGCCATG
GCACCAGGCCCATCACTAGCTCCAGCACCAGCTCCAGGACCAGGTGGACCCCACCACCAC
TTCGACGGTGAAAGCCAAGTAAAAGATTTCATCCAAACTCTATTGCATTACGGTGGTTAC
AATGAATTAGCCGACATTCTCGTAAATCTCACTTCCTTAGCTACGGAAATGGGGAGATTA
GTGTCCGAAGGGTACGTTTTAACTGTTTTAGCACCTAACGATGAAGCGATGGCGAAATTA
ACGACGGATCAGCTGTCCGAACCGGGTGCGCCGGAGCAGATAATGTATTATCATTTGATA
CCGGAGTATCAAACGGAGGAAAGTATGTATAATGCCGTGAGGAGATTTGGGAAAGTGAAG
TATGATACTTTAAGATTGCCACATAAAGTTGTTGCTGAAGAAGCTGACGGTTCTGTGAAA
TTTGGGGATGCTGAAGGGTCGGCGTATTTGTTCGACCCGGATATTTACACCGACGGCAGG
ATTTCCGTTCAGGGGATTGACGGAGTTTTGTTTCCGGTTGAGGAAATTAAGGCTGCTCCT
GTAGCTGCTCCTGTTGCTAAAGTTGTTGCCAAACCAAGAAGAGGAAAGTTGATGGAAGTA
GCATGTAGTGTGCTGGGGTCATTCTGTTAA

Peptide Sequence

PEP ID

XP_016506029.1
PEP Infomation

PREDICTED: fasciclin-like arabinogalactan protein 17 [Nicotiana tabacum]
Sequence

MDSQIYGFLFTLILFFSITGAALQESPSAKHQMSAPQINSNSVLVALLDSHYTELSELVE
KALLLQTLEEAVTKHNITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQKLLLFHMIPTR
IQSLHWPKTELKPRHHSTLCPGDERISVLRKSGDRMVSMAKVIRADDIIKPDGIIHGIER
VLIPKSVQQDFNTRRSLRSISAVLPEGAPEVDPRTNRLKKKPTIPVPAGAPPVLPIYSAM
APGPSLAPAPAPGPGGPHHHFDGESQVKDFIQTLLHYGGYNELADILVNLTSLATEMGRL
VSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVK
YDTLRLPHKVVAEEADGSVKFGDAEGSAYLFDPDIYTDGRISVQGIDGVLFPVEEIKAAP
VAAPVAKVVAKPRRGKLMEVACSVLGSFC

Transcript Sequence

Gene sequence data has not been registered.